User contributions
From CMIC
- 10:44, 16 May 2017 (diff | hist) . . (-57) . . Main Page (→Current Open-source software projects)
- 10:43, 13 March 2017 (diff | hist) . . (+3) . . NiftyReg install (current)
- 13:05, 9 December 2015 (diff | hist) . . (+3,339) . . N Niftyreg Groupwise (Created page with "The NiftyReg install bin folder contains two shell scripts that can be used to create a groupwise average space: <code>groupwise_niftyreg_run.sh</code> and <code>groupwise_ni...") (current)
- 12:49, 9 December 2015 (diff | hist) . . (+44) . . NiftyReg documentation (→Step-by-step application examples) (current)
- 14:59, 24 November 2015 (diff | hist) . . (+8) . . Full brain parcellation using Geodesic Information Flow (current)
- 09:09, 23 November 2015 (diff | hist) . . (0) . . NiftyPipe (current)
- 16:07, 28 August 2015 (diff | hist) . . (0) . . m NiftyPipe Tutorial (Mmodat moved page NiftyPipe documentation to NiftyPipe Tutorial)
- 16:07, 28 August 2015 (diff | hist) . . (+32) . . N NiftyPipe documentation (Mmodat moved page NiftyPipe documentation to NiftyPipe Tutorial) (current)
- 08:26, 27 August 2015 (diff | hist) . . (+8) . . NiftyPipe
- 08:25, 27 August 2015 (diff | hist) . . (+14) . . NiftyPipe
- 08:25, 27 August 2015 (diff | hist) . . (+2) . . NiftyPipe
- 08:24, 27 August 2015 (diff | hist) . . (-2) . . NiftyPipe
- 08:23, 27 August 2015 (diff | hist) . . (+577) . . NiftyPipe
- 08:08, 27 August 2015 (diff | hist) . . (+24) . . Prerequisite DTI-TK (current)
- 12:17, 26 August 2015 (diff | hist) . . (0) . . Nm User:Bpresles (Creating user page for new user.) (current)
- 12:17, 26 August 2015 (diff | hist) . . (+293) . . Nm User talk:Bpresles (Welcome!) (current)
- 15:59, 25 August 2015 (diff | hist) . . (+956) . . NiftyPipe
- 15:34, 25 August 2015 (diff | hist) . . (+25) . . Prerequisite DTI-TK
- 13:46, 25 August 2015 (diff | hist) . . (+2,559) . . DTI pre-processing
- 12:51, 25 August 2015 (diff | hist) . . (+85) . . Main Page
- 12:49, 25 August 2015 (diff | hist) . . (+74) . . Cross-sectional TBSS
- 12:49, 25 August 2015 (diff | hist) . . (+72) . . Groupwise registration using DTI-TK (current)
- 12:47, 25 August 2015 (diff | hist) . . (+4) . . Groupwise registration using DTI-TK
- 12:44, 25 August 2015 (diff | hist) . . (+1) . . NiftyPipe Tutorial
- 12:43, 25 August 2015 (diff | hist) . . (+3) . . NiftyPipe Tutorial
- 12:43, 25 August 2015 (diff | hist) . . (0) . . m DTI pre-processing (Mmodat moved page DTI processing to DTI pre-processing)
- 12:43, 25 August 2015 (diff | hist) . . (+32) . . N DTI processing (Mmodat moved page DTI processing to DTI pre-processing) (current)
- 11:27, 25 August 2015 (diff | hist) . . (-2) . . Prerequisite DTI-TK
- 11:26, 25 August 2015 (diff | hist) . . (+165) . . Prerequisite DTI-TK
- 11:22, 25 August 2015 (diff | hist) . . (+222) . . Prerequisite DTI-TK
- 11:18, 25 August 2015 (diff | hist) . . (+254) . . N Prerequisite DTI-TK (Created page with "In order to use the the DTI regional and TBSS pipeline, the DTITK package has to be installed on the system. On the computer science cluster, it can be found here: <code>IN P...")
- 11:12, 25 August 2015 (diff | hist) . . (+1) . . NiftyPipe Tutorial
- 11:12, 25 August 2015 (diff | hist) . . (+26) . . NiftyPipe Tutorial
- 11:07, 25 August 2015 (diff | hist) . . (+132) . . Cross-sectional TBSS
- 11:02, 25 August 2015 (diff | hist) . . (+155) . . Cross-sectional TBSS
- 11:00, 25 August 2015 (diff | hist) . . (+661) . . Cross-sectional TBSS
- 16:04, 24 August 2015 (diff | hist) . . (+269) . . Cross-sectional TBSS
- 15:54, 24 August 2015 (diff | hist) . . (+1,064) . . Cross-sectional TBSS
- 15:00, 24 August 2015 (diff | hist) . . (0) . . Nm User:Kinnunen (Creating user page for new user.) (current)
- 15:00, 24 August 2015 (diff | hist) . . (+293) . . Nm User talk:Kinnunen (Welcome!) (current)
- 14:53, 24 August 2015 (diff | hist) . . (0) . . Nm User:Martina.bocchetta (Creating user page for new user.) (current)
- 14:53, 24 August 2015 (diff | hist) . . (+293) . . Nm User talk:Martina.bocchetta (Welcome!) (current)
- 13:43, 24 August 2015 (diff | hist) . . (+15) . . Cross-sectional TBSS
- 13:43, 24 August 2015 (diff | hist) . . (+470) . . Cross-sectional TBSS
- 11:56, 24 August 2015 (diff | hist) . . (-4) . . NiftyPipe Tutorial
- 11:54, 24 August 2015 (diff | hist) . . (+24) . . Groupwise registration using DTI-TK
- 11:53, 24 August 2015 (diff | hist) . . (+3,641) . . N Cross-sectional TBSS (Created page with "The nipype script to perform cross-sectional TBSS is called <code>perform_dti_tbss_cross_sectional.py</code> This pipeline is to replicate the work presented in the following...")
- 11:33, 24 August 2015 (diff | hist) . . (+28) . . NiftyPipe Tutorial
- 08:57, 24 August 2015 (diff | hist) . . (0) . . Nm User:Kourouklides (Creating user page for new user.) (current)
- 08:57, 24 August 2015 (diff | hist) . . (+293) . . Nm User talk:Kourouklides (Welcome!) (current)
- 08:56, 24 August 2015 (diff | hist) . . (0) . . Nm User:N.toussaint (Creating user page for new user.) (current)
- 08:56, 24 August 2015 (diff | hist) . . (+293) . . Nm User talk:N.toussaint (Welcome!) (current)
- 15:48, 20 August 2015 (diff | hist) . . (+28) . . Groupwise registration using DTI-TK
- 15:39, 20 August 2015 (diff | hist) . . (+45) . . Groupwise registration using DTI-TK
- 15:38, 20 August 2015 (diff | hist) . . (+1) . . Groupwise registration using DTI-TK
- 15:37, 20 August 2015 (diff | hist) . . (+49) . . NiftyPipe
- 15:37, 20 August 2015 (diff | hist) . . (+4) . . N DTI pre-processing (Created page with "TODO")
- 15:37, 20 August 2015 (diff | hist) . . (+22) . . NiftyPipe Tutorial
- 15:36, 20 August 2015 (diff | hist) . . (+99) . . Groupwise registration using DTI-TK
- 15:25, 20 August 2015 (diff | hist) . . (+3,184) . . N Groupwise registration using DTI-TK (Created page with " The python script to run a groupwise of diffusion MR image is <code>perform_dti_groupwise.py</code> The script help is the following: <pre> usage: perform_dti_groupwise.py [...")
- 13:46, 20 August 2015 (diff | hist) . . (+2) . . NiftyPipe Tutorial
- 13:46, 20 August 2015 (diff | hist) . . (+31) . . NiftyPipe Tutorial
- 14:42, 18 June 2015 (diff | hist) . . (+134) . . N NiftyPipe Tutorial (Created page with "List of the different pipelines available: * Structural images ** blabla * Functional images ** blabla * Diffusion images ** blabla")
- 14:40, 18 June 2015 (diff | hist) . . (+24) . . N NiftyPipe (Created page with "Description of NiftyPipe")
- 12:14, 18 June 2015 (diff | hist) . . (-1) . . NiftySeg install (→Build)
- 13:13, 11 March 2015 (diff | hist) . . (+1) . . NiftyReg
- 13:10, 11 March 2015 (diff | hist) . . (-47) . . NiftyReg
- 13:08, 11 March 2015 (diff | hist) . . (+434) . . NiftyReg Boundary Shift Integral Tutorial (current)
- 11:36, 11 March 2015 (diff | hist) . . (+2) . . NiftyReg Boundary Shift Integral Tutorial
- 11:35, 11 March 2015 (diff | hist) . . (+1,414) . . NiftyReg Boundary Shift Integral Tutorial
- 11:20, 11 March 2015 (diff | hist) . . (+1,487) . . N NiftyReg Boundary Shift Integral Tutorial (Created page with "Starting from two longitudinal images from the same subject and associated segmentations of region of interest, one can use the Boundary Shift Integral (BSI) to assess the atr...")
- 11:19, 11 March 2015 (diff | hist) . . (+79) . . NiftyReg documentation (→Step-by-step application examples)
- 11:18, 11 March 2015 (diff | hist) . . (0) . . N File:Diff bsi aff.png (current)
- 11:18, 11 March 2015 (diff | hist) . . (0) . . N File:Diff bsi noreg.png (current)
- 11:17, 11 March 2015 (diff | hist) . . (0) . . N File:Brain followup bsi.png (current)
- 11:17, 11 March 2015 (diff | hist) . . (0) . . N File:Brain baseline bsi.png (current)
- 11:17, 11 March 2015 (diff | hist) . . (0) . . N File:Followup bsi.png (current)
- 11:17, 11 March 2015 (diff | hist) . . (0) . . N File:Baseline bsi.png (current)
- 12:00, 10 March 2015 (diff | hist) . . (+20) . . NiftyReg Segmentation Propagation Tutorial (current)
- 11:59, 10 March 2015 (diff | hist) . . (0) . . NiftyReg Segmentation Propagation Tutorial
- 11:58, 10 March 2015 (diff | hist) . . (0) . . NiftyReg Segmentation Propagation Tutorial
- 11:58, 10 March 2015 (diff | hist) . . (+374) . . NiftyReg Segmentation Propagation Tutorial
- 10:23, 10 March 2015 (diff | hist) . . (+1) . . NiftyReg documentation (→Step-by-step application examples)
- 10:23, 10 March 2015 (diff | hist) . . (+2) . . NiftyReg documentation
- 10:22, 10 March 2015 (diff | hist) . . (0) . . m NiftyReg Segmentation Propagation Tutorial (Mmodat moved page NiftyReg Segmention Propagation Tutorial to NiftyReg Segmentation Propagation Tutorial: misspelt title)
- 10:22, 10 March 2015 (diff | hist) . . (+56) . . N NiftyReg Segmention Propagation Tutorial (Mmodat moved page NiftyReg Segmention Propagation Tutorial to NiftyReg Segmentation Propagation Tutorial: misspelt title) (current)
- 16:38, 9 March 2015 (diff | hist) . . (0) . . NiftyReg install
- 16:38, 9 March 2015 (diff | hist) . . (+721) . . NiftyReg install
- 16:18, 9 March 2015 (diff | hist) . . (+855) . . NiftyReg install
- 16:11, 9 March 2015 (diff | hist) . . (+27) . . NiftyReg Segmentation Propagation Tutorial
- 16:10, 9 March 2015 (diff | hist) . . (+75) . . NiftyReg documentation (→Step-by-step application examples)
- 16:09, 9 March 2015 (diff | hist) . . (+3,142) . . N NiftyReg Segmentation Propagation Tutorial (Created page with "Segmentation propagation uses image registration to transfer segmentations (or labels) from the space of one image to the space of another. Assuming a template image (templat...")
- 16:09, 9 March 2015 (diff | hist) . . (0) . . NiftyReg
- 16:08, 9 March 2015 (diff | hist) . . (0) . . N File:Labels nonlin.png (current)
- 16:08, 9 March 2015 (diff | hist) . . (0) . . N File:Labels affine.png (current)
- 16:07, 9 March 2015 (diff | hist) . . (0) . . N File:Labels no reg.png (current)
- 16:00, 9 March 2015 (diff | hist) . . (0) . . N File:Diff nonlin.png (current)
- 16:00, 9 March 2015 (diff | hist) . . (0) . . N File:Diff no reg.png (current)
- 16:00, 9 March 2015 (diff | hist) . . (0) . . N File:Diff affine.png (current)
- 15:56, 9 March 2015 (diff | hist) . . (-2) . . NiftyReg
- 15:53, 9 March 2015 (diff | hist) . . (+2) . . NiftyReg
- 15:49, 9 March 2015 (diff | hist) . . (+2,102) . . NiftyReg Tutorial Segmention Propagation (current)
- 15:08, 9 March 2015 (diff | hist) . . (+90) . . NiftyReg Tutorial Segmention Propagation
- 14:52, 9 March 2015 (diff | hist) . . (+677) . . NiftyReg Tutorial Segmention Propagation
- 14:52, 9 March 2015 (diff | hist) . . (+4) . . N NiftyReg Tutorial Segmention Propagation (Created page with "test")
- 14:51, 9 March 2015 (diff | hist) . . (-2) . . NiftyReg
- 14:51, 9 March 2015 (diff | hist) . . (0) . . N File:Labels.png (current)
- 14:50, 9 March 2015 (diff | hist) . . (0) . . N File:New image.png (current)
- 14:50, 9 March 2015 (diff | hist) . . (0) . . N File:Template.png (current)
- 14:49, 9 March 2015 (diff | hist) . . (+639) . . N NiftyReg Tutorial - Segmention Propagation (Created page with "Segmentation propagation uses image registration to transfer segmentations (or labels) from the space of one image to the space of another. Assuming a template image (templat...") (current)
- 14:49, 9 March 2015 (diff | hist) . . (+1) . . NiftyReg
- 14:47, 9 March 2015 (diff | hist) . . (+639) . . N NiftyReg Tutorial: segmention propagation (Created page with "Segmentation propagation uses image registration to transfer segmentations (or labels) from the space of one image to the space of another. Assuming a template image (templat...") (current)
- 13:56, 9 March 2015 (diff | hist) . . (+1) . . NiftyReg
- 13:55, 9 March 2015 (diff | hist) . . (+155) . . NiftyReg
- 11:49, 26 November 2014 (diff | hist) . . (+18) . . NiftyReg install (→MacOs)
- 11:44, 3 November 2014 (diff | hist) . . (+131) . . NiftyReg install (→MacOs)
- 14:07, 31 October 2014 (diff | hist) . . (+43) . . NiftyReg install (→MacOs)
- 14:02, 31 October 2014 (diff | hist) . . (-1) . . NiftyReg install (→MacOs)
- 14:01, 31 October 2014 (diff | hist) . . (+607) . . NiftyReg install (→MacOs)
- 13:39, 31 October 2014 (diff | hist) . . (+165) . . NiftyReg install (→MacOs)
- 11:46, 31 October 2014 (diff | hist) . . (+1,543) . . NiftyReg install (→MacOs)
- 17:05, 30 October 2014 (diff | hist) . . (-132) . . NiftyReg install (→MacOs)
- 17:00, 30 October 2014 (diff | hist) . . (+4) . . NiftyReg install
- 16:50, 30 October 2014 (diff | hist) . . (+188) . . NiftyReg install (→Linux / MacOs)
- 16:48, 30 October 2014 (diff | hist) . . (+15) . . NiftyReg install
- 16:48, 30 October 2014 (diff | hist) . . (+295) . . NiftyReg install (→Linux / MacOs)
- 12:31, 3 October 2014 (diff | hist) . . (+45) . . NiftyReg documentation
- 11:59, 3 October 2014 (diff | hist) . . (-5) . . NiftyReg (→Note)
- 11:58, 3 October 2014 (diff | hist) . . (+10) . . NiftyReg
- 11:58, 3 October 2014 (diff | hist) . . (+170) . . NiftyReg
- 11:55, 3 October 2014 (diff | hist) . . (+2) . . NiftyReg install (→Source)
- 11:35, 3 October 2014 (diff | hist) . . (+1,510) . . Reg tools (→Usage) (current)
- 11:35, 3 October 2014 (diff | hist) . . (+1,636) . . Reg average (→Usage) (current)
- 11:34, 3 October 2014 (diff | hist) . . (+770) . . Reg jacobian (→Usage) (current)
- 11:34, 3 October 2014 (diff | hist) . . (+3,799) . . Reg transform (→Usage) (current)
- 11:33, 3 October 2014 (diff | hist) . . (+1,115) . . Reg resample (current)
- 11:33, 3 October 2014 (diff | hist) . . (+5,664) . . Reg f3d (current)
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg tools (Created page with "==Usage== <code><pre> </pre></code>")
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg average (Created page with "==Usage== <code><pre> </pre></code>")
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg jacobian (Created page with "==Usage== <code><pre> </pre></code>")
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg transform (Created page with "==Usage== <code><pre> </pre></code>")
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg resample (Created page with "==Usage== <code><pre> </pre></code>")
- 11:32, 3 October 2014 (diff | hist) . . (+36) . . N Reg f3d (Created page with "==Usage== <code><pre> </pre></code>")
- 11:31, 3 October 2014 (diff | hist) . . (+3,144) . . N Reg aladin (Created page with "== Usage == <code><pre> * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Block Matching algorithm for global registration. Based on Oursel...") (current)
- 11:28, 3 October 2014 (diff | hist) . . (+148) . . N NiftyReg documentation (Created page with "== List of executables == * reg_aladin * reg_f3d * reg_resample * reg_transform * reg_jacobian * reg_average * reg_tools")
- 11:26, 3 October 2014 (diff | hist) . . (+103) . . NiftyReg
- 11:23, 3 October 2014 (diff | hist) . . (+529) . . N NiftyReg (Created page with " NiftyReg is an open-source software for efficient medical image registration. It has been mainly developed by member of the Translational Imaging Group with the Centre for M...")
- 10:51, 3 October 2014 (diff | hist) . . (+2,449) . . N NiftyReg install (Created page with "==Requirements== * CMake is a open-source cross-platform build system. You can download it from [http://www.cmake.org/download/ here]. * A Compiler. Using MacOS, you can inst...")
- 10:20, 3 October 2014 (diff | hist) . . (-45) . . m Main Page
- 09:29, 3 October 2014 (diff | hist) . . (-65) . . m Main Page (Minor refactoring of the page)