NiftyReg Tutorial: segmention propagation

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Segmentation propagation uses image registration to transfer segmentations (or labels) from the space of one image to the space of another.

Assuming a template image (template.nii) and its associated segmentation (labels.nii), on can transfer the label information into the space of another image (new_image.nii). For this example, we used the file 1000_3.nii from neuromorphometrics and its associated segmentation as template and subject 1001_3.nii from the same database as new image.

Input images
File:Example.jpg
template.nii labels.nii new_image.nii