NiftyReg Tutorial Segmention Propagation
From CMIC
Segmentation propagation uses image registration to transfer segmentations (or labels) from the space of one image to the space of another.
Assuming a template image (template.nii) and its associated segmentation (labels.nii), on can transfer the label information into the space of another image (new_image.nii). For this example, we used the file 1000_3.nii from neuromorphometrics and its associated segmentation as template and subject 1001_3.nii from the same database as new image. Below are shown the ortho-views (mid-plane along each axis) of the three input images:
