Difference between revisions of "NiftyPipe Tutorial"

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* Structural images
 
* Structural images
** TODO
+
** [[T1 bias correction using N4]]
 +
** [[Full brain parcellation using Geodesic Information Flow]]
 +
** [[STEPS]]
 +
** [[Groupwise Registration]]
  
 
* Functional images
 
* Functional images
** TODO
+
** [[Resting State fMRI processing]]
 +
** [[Compute SUVR]]
  
 
* Diffusion images
 
* Diffusion images
 
** [[Prerequisite DTI-TK]]
 
** [[Prerequisite DTI-TK]]
 
** [[DTI pre-processing]]
 
** [[DTI pre-processing]]
 +
** [[NODDI processing]]
 
** [[Groupwise registration using DTI-TK]]
 
** [[Groupwise registration using DTI-TK]]
 +
** [[Groupwise regional analysis]]
 
** [[Cross-sectional TBSS]]
 
** [[Cross-sectional TBSS]]
  
* [[DRC specific instructions]]
+
* DRC specific pipelines
 +
** [[DTI pre-processing for the DRC]]
 +
** [[Full brain parcellation for the DRC]]

Latest revision as of 16:39, 13 November 2015

List of the different pipelines available: