|
|
| (8 intermediate revisions by 2 users not shown) |
| Line 1: |
Line 1: |
| − | == Download ==
| |
| − | The code can be easily build using cmake (http://www.cmake.org/). The latest
| |
| − | version can be downloaded from http://www.cmake.org/cmake/resources/software.html
| |
| | | | |
| − | To download the latest version, please check out the code by copying the following line to the terminal:
| |
| − |
| |
| − | <code>
| |
| − | git clone git://git.code.sf.net/p/niftyseg/git niftyseg-git
| |
| − | </code>
| |
| − |
| |
| − | A packaged stable release is also available at this website.
| |
| − |
| |
| − | == Build ==
| |
| − | Assuming that the code source are in the source path folder, you will have to first create a new folder, i.e. build path (step 1) and then to change directory to move into that folder (step 2).
| |
| − |
| |
| − | <code>
| |
| − | mkdir build path
| |
| − |
| |
| − | cd build path
| |
| − | </code>
| |
| − |
| |
| − | There you will need to call ccmake (step 3a) in order to fill in the
| |
| − | build options. If you don’t want to specify options, we could just use cmake
| |
| − | (step 3b) and the default build values will be used.
| |
| − |
| |
| − | <code>
| |
| − | ccmake source path
| |
| − |
| |
| − | cmake source path
| |
| − | </code>
| |
| − |
| |
| − | The main option in the ccmake gui are defined bellow:
| |
| − | <code>
| |
| − | > CMAKE BUILD INSTALL options are Release, RelWithDebInfo or Debug
| |
| − |
| |
| − | > INSTALL_PRIORS Will install the population atlas for the segmentation pipeline
| |
| − |
| |
| − | > INSTALL_PRIORS_DIRECTORY Directory where the population atlas is going to be installed
| |
| − |
| |
| − | > INSTALL_NIFTYREG Will fetch and automatically configure and install the niftireg package.
| |
| − | </code>
| |
| − |
| |
| − | Once all the flags are properly filled in, just press the ”c” to configure the Make-
| |
| − | file and then the ”g” key to generate them.
| |
| − |
| |
| − | == Install ==
| |
| − | In the prompt, you just have to make (step 4) first and then make install (step 5).
| |
| − |
| |
| − | <code>
| |
| − | make
| |
| − |
| |
| − | make install
| |
| − | </code>
| |
